Category Archives: Plants & Wildlife

Nature’s Patterns

By Bruce Rottink, Volunteer Nature Guide and Retired Research Forester

At the most basic level, the universe is orderly, although sometimes that order is not immediately apparent.  Albert Einstein famously remarked, “God does not play dice with the universe.”  Fortunately, in the forests of Tryon Creek State Natural Area (TCSNA) we have many wonderful examples of the orderliness of the universe.  For this article I will focus on the symmetry that we see in so many of the organisms in the forest.

 

The most common types of symmetry we can see at TCSNA are typically referred to as spherical, radial and bilateral symmetry.  Another way to think about these kinds of symmetry is symmetry around a point, symmetry around a line and symmetry around a plane.

 

Spherical Symmetry (Symmetry around a point)   

With spherical symmetry, there is one point in the middle of an object, and no matter which direction you go from that point, everything is the same.  If you’ve already guessed that all the examples are spheres, you’re right!  The seeds and fruits of some plants are the best examples of this at TCSNA.  For example, the picture below shows the fruit of a bedstraw (a.k.a. “cleaver”) plant (Gallium spp.)  The scar in the middle of the picture is where the fruit was attached to the stem.

photo-1

Bedstraw seed with spherical symmetry

 

Other forms of symmetry get a little more interesting.

 

Radial Symmetry (Symmetry around a line)

A second type of symmetry is radial, where there is a central axis to the object, and the parts all stick out equally in any direction from that central axis.  One of the best examples can be seen in this mushroom fruiting body.  Imagine the red dashed line going down the center of the stem of the mushroom.  At a given distance from the ground, if you travel out at any 90° angle to that red line the mushroom structure is identical.

photo-2

A mushroom with radial symmetry

 

The picture below is of the underside of the mushroom’s cap.  I’ve put in a red dot to indicate the central axis of the fruiting body.  No matter which direction you look out from the center, the structure looks essentially the same.  The edges of the gills that you see as lines, all point to the center of the mushroom.

 

Looking at the underside of the mushroom’s cap provides an additional perspective on radial symmetry.

photo-3

Underside of a mushroom cap, showing radial symmetry

 

 The mushroom above is an example of the simplest kind of radial symmetry.  But radial symmetry can be more complicated, and more interesting.

 

Spirals – A special case of radial symmetry

The mushroom pictured above is a very simple example of radial symmetry, but more complex examples can be easily found at TCSNA.  The most obvious are some of our native conifers.  For example, at first glance the scales on a Douglas-fir (Pseudotsuga menziesii) cone might appear to be arranged in a random pattern.

photo-4

Douglas-fir cone

 

In fact, the scales on a Douglas-fir cone are arranged in a definite spiral pattern around a central stalk.  The scales are actually arranged in multiple spiral patterns.  To illustrate this I painted the bracts (the three-pointed papery structure attached to each cone scale) to highlight these spirals.  Each spiral is a different color.  The results can be seen in the movie below.  Since each cone scale is actually part of three different spiral patterns, I have painted three different cones, each illustrating one of the three patterns.  A different color of paint was used to mark each of the spirals.  Watch first one cone and then the others to see these three different spiral patterns.

 

 

You can see in the movie that there are a set of three spirals of cone scales going in one direction around the cone axis at a very gradual angle.  There is a second set of five spirals going around the cone at a steeper angle in the opposite direction.  Finally, there is a third set of eight very steep spirals going about the cone in the same direction as the first set of spirals.  So each scale is part of all three spirals going around the cone’s central axis.

 

In any given plant, the number of spirals are a part of a set of numbers known as the Fibonacci sequence of numbers.  The Fibonacci numbers were described by an Italian mathematician more than 800 years ago (and Indian mathematicians had apparently described them even before that).  Starting with the number 1, each subsequent number is the sum of the two previous numbers.  Below is the start of the original Fibonacci sequence (the “modern” version starts with zero, which has no impact on the rest of the sequence):

 

1, 1, 2, 3, 5, 8, 13, 21, 34, etc, etc, ad infinitum.

 

In the botanical literature, it is traditionally reported that the number of spirals in any plant are always two consecutive numbers of the Fibonacci sequence.  With one exception.  The pineapple fruit is almost always described as having three spirals.  I present here the possibility that the Douglas-fir cone, like the pineapple, is composed of three spirals, not the traditionally recognized two.  But, whether it’s two spirals or three, it represents an example of order in nature.

 

Bilateral Symmetry (Symmetry around a plane)

Finally, there is bilateral symmetry, which is symmetry with respect to a plane (think of a sheet of glass).  The structure is identical on both sides of the plane.  The butterfly below is a beautiful example of bilateral symmetry.  Think of an imaginary sheet of glass running vertically through the butterfly’s body.  Each side of the body is an identical mirror image of the other side.  The easiest feature to see in the photo below are the patterns on the wings.

photo-5

Red admiral butterfly (Vanessa atalanta) near the Middle Creek Trail

 

Plants often exhibit bilateral symmetry, as exemplified by the bigleaf maple (Acer macrophyllum) fruit shown below.  In fact there are two different planes of symmetry.  The first one is centered around the red line drawn on the picture.  The second plane of symmetry is represented by the paper on which this picture could be printed.  The front and back sides of the seed are identical.

photo-6

Bigleaf maple seed with two planes of bilateral symmetry

 

But wait… Not everything in the forest is symmetrical!

My favorite example of a non-symmetric organism in the forest is the banana slug (Ariolimax columbianus).  Below are two pictures of the same slug.  One picture is of the right side of the forward part of its body, and the other is of the left side of the forward part of its body.  As you can see, the slug only has one breathing hole, and it is on the right side of its body.  Thus, the slug does not display symmetry in this regard, it is asymmetrical.  Every slug has its breathing hole on the right hand side of the body.

photo-7

Photo left: right side of slug’s body (arrow points to breathing hole). Photo right: left side of slug’s body (no breathing hole)

 

But that’s not the only way a slug is asymmetrical!  Look at the coloration on the body of the slug pictured below.  A black spot on one side of the slug is not matched with an equal sized, or shaped black spot on the other side of its body.

photo-8

Banana slug showing asymmetrical coloration patterns

 

Why symmetry?

Symmetry is often useful, such as birds having one wing on each side of its body.  Imagine a bird trying to fly with both wings on the same side of its body.  But In truth, while nature has intended many things to be symmetrical, oftentimes the symmetry is not perfect.  These imperfections may result from mutations during development, or accidents.  So what you ask?  Scientists have discovered that some animals, like female peahens and barn swallows, prefer males with symmetrical tails.  To the birds, symmetry could be proof of a potential mate’s normalcy, which is often the safe choice.

 

The symmetrical patterns that we see in much of the flora and fauna of TCSNA provide some reassurance in the orderliness of the universe.  It suggests that perhaps Einstein was correct!

Fungi: The Amazing Ancients

By Bruce Rottink, Volunteer Nature Guide & Retired Research Forester

 

Fungi (singular = fungus) are one of the oldest types of living organisms on earth, dating back approximately 1 Billion years. It may be slightly easier to grasp if I say that fungi have been around approximately 12 times longer than the earliest primate ancestors of humans. The fungi have used their time to develop diverse, and sometimes complex lifestyles!

The basic building block of fungi is a hypha (plural = hyphae) which is basically a long branching fungal thread. They can be seen in the picture below. This growth was on the underside of a leaf that was lying on the damp soil. The hyphae are attached to both the cottonwood (Populus balsamifera ssp. trichocarpa) leaf and a Douglas-fir (Pseudotsuga menziesii) needle. The hyphae are sometimes collectively referred to as mycelium (plural = mycelia).

photo-1

White fungal hyphae on the underside of a decaying black cottonwood leaf

 

Fungi, unlike plants, do not make their own food. This has led many fungi to adopt one of three lifestyles; a) a decayer of non-living organic matter; b) a parasite/disease of living organisms; c) a helpful life-partner of another organism. All three of these life styles can be found at Tryon Creek State Natural Area (TSCNA).

 

Fungi as Recyclers

Fungi at TCSNA recycle (“decay”) many things, as pointed out in my Naturalist Note of October 2015. This can be thought of as their “rotting” function. This is nicely illustrated in the above photo, where the fungi are probably rotting both the leaf and the needle. Rotting releases nutrients in the organic matter to be re-used by other organisms. Unfortunately, some of the most obvious examples of this at TCSNA are fungi which are decaying dog feces (a. k. a. “poop”) left behind by dogs tended by those few people with apparently little regard for either the park or other visitors.

Fungi decaying dog feces alongside Old Main Trail

Fungi decaying dog feces alongside Old Main Trail

 

Fungi as parasites or disease

Attacking dead things is one lifestyle, being a parasite, or disease, is quite another. If you’ve ever had “athlete’s foot” you know first-hand about fungi causing diseases. Some of the fungi at TCSNA are diseases too. One tree disease is caused by the honey fungus (Armillaria mellea). They produce thick black shoestring-like structures called “rhizomorphs” under the bark of this log (see below) alongside Old Main Trail. Rhizomorphs are typical of the honey fungus. Species that are rated as “highly susceptible” to this fungal disease include our grand fir (Abies amabilis), Douglas-fir and western hemlock (Tsuga heterophylla).

Black rhizomorphs of Armillaria mellea often grow between the wood and the bark

Black rhizomorphs of Armillaria mellea often grow between the wood and the bark

 

Fungi as life partners

Sometimes fungi will form a close, often physically interwoven relationship with another organism that benefits both of them. A relationship that benefits both partners is called “mutualism” which is a specific type of symbiosis. One of the most common mutualistic relationships fungi form is with forest plants, including most trees. Fungi will grow on, or sometimes into, the roots of plants, forming structures called “mycorrhizae” (from the Greek “fungus root”).” Long fungal hyphae will extend out from the mycorrhizae into the soil. In this relationship, the plant provides the fungi with food (think “sugar”). In return, using chemical means the plant does not have, the fungi very efficiently extracts nutrients from the soil, especially phosphorus, and transports it to the plant.

Another advantage to the plant is that mycorrhizal fungal mycelium are dramatically smaller in diameter than the plant’s own roots. It takes less energy to build the mycelium than it would take to build its own roots. Thus for the same expenditure of energy on the part of the plant, it can tap into a much greater volume of soil by using the finer fungal threads. Over 2,000 species of fungus have been identified as potential mycorrhizal partners of Douglas-fir.

The coral fungus shown below is one of the fungi found at TCSNA that can have a mycorrhizal relationship with many tree species.

Coral fungus fruiting bodies

Coral fungus fruiting bodies

 

Another totally different kind of symbiosis, is when a fungus lives with an algae to form what we call a lichen. The fungus does a great job of providing moisture for the algae and the algae is able to photosynthesize (create sugar) which supports the fungus. There are thousands of species of lichen world-wide, but they have been grouped by their form into several different types. The fruticose lichen has lots of branch-like structures. The crustose lichen often looks like a thick layer of paint, and the foliose types have what looks like primitive leaves.

Fruticose lichen on a stick

 

Crustose lichen on tree bark

Crustose lichen on tree bark

 

Foliose lichen on a branch which is resting on a log

Foliose lichen on a branch which is resting on a log

                                                

In the lichen, only the fungus reproduces sexually, and if some algae cells happen to cling to the spore as it floats away, great; otherwise, when the fungus lands, it will have to find some new algae with which to start a new lichen.

 

Fungi use chemical warfare

You don’t survive a billion years without picking up a few tricks along the way. Fungi have developed a broad array of chemical weapons in their fight for survival. Some fungi have been found to produce chemicals which inhibit competing organisms, like bacteria and other fungi, from growing near the fungus. Recall that the medicine penicillin was originally isolated from a fungus.

Some of these chemicals are also very effective in killing cancer cells. A chemical extracted from yew bark, taxol, has been known for years to effectively treat some breast cancers. Researchers have recently discovered that a fungus growing inside the yew bark, Taxomyces andreanae, produces the chemical taxol. Whether or not the yew tree itself also produces the chemical is not clear.

“By the sword you did your work, and by the sword you die”

The sentiment above, expressed by the Greek playwright Aeschylus in the 5th century BCE, applies to fungi as well as people. Just as fungi sometimes use chemical warfare against other organisms, sometimes chemical warfare is used against fungi too. TCSNA’s garlic mustard (Alliaria petiolata), an invasive plant native to Europe, produces and releases chemicals to stifle fungal growth. Since an overwhelming majority of plants are mycorrhizal, killing fungi interferes with the growth of plants that would otherwise compete with garlic mustard. Garlic mustard itself is one of a small group of plants that doesn’t have mycorrhizae.

 

Garlic mustard – First year plants near the North Horse Trail

Garlic mustard – First year plants near the North Horse Trail

 

One the principal chemicals released by the garlic mustard is allyl isothiocyanate. This chemical is released into the soil, and is toxic to the fungi located in the soil. Interestingly enough, in garlic mustard’s native Europe, the soil fungi are resistant to the garlic mustard’s chemical. Apparently our native fungi haven’t developed that resistance yet.

 

And sometimes life gets complicated!

There are a few fungi which have a lifestyle which is one of the most complicated of any organism on earth. These are called “heteroecious rust fungi.” These fungi are plant diseases. Their unique characteristic is that they need to use two species of plants to complete their life cycle. One of these fungal species that we may have at TCSNA is the “common fir-bracken rust” (Uredinopsis pteridis). This fungi spends part of its life cycle growing on bracken fern (Pteridium aquilinum) and the other part on grand fir.

 

Left: Bracken fern near TCSNA bike path. Right: Needles and cones of grand fir near Cedar Trail

Left: Bracken fern near TCSNA bike path. Right: Needles and cones of grand fir near Cedar Trail

 

I have no proof that we have this disease at TCSNA, but since we have both hosts here, it is a distinct possibility. Furthermore, this fungus sequentially produces not one, not two, but five different kinds of spores during its life cycle. Of the different spore types, some are produced only on the fern, and the others are produced only on the grand fir. Frankly, this complicated a life cycle boggles my mind. The two questions that plague me are: 1) How did this complicated life cycle ever get started? and 2) What conceivable advantage is there to the fungi in needing two hosts? The answers have eluded me.

 

The fungal internet

Human’s internet is a johnny-come-lately compared to the “internet” that fungi developed long ago. Strands of fungus often connect the root systems of two trees in the forest. The trees don’t even have to be the same species. The overall results is that fungi of one species or another, connect almost all the trees in the forest. Something like this:

photo-10

 

It appears that fungi connect nearly every tree in the forest with other trees. While there is clear evidence that some small amount of sugars are passed from tree to tree, this fungal internet may have a far more interesting function.

Two different studies have found that plants apparently transfer “information” from one to another via their interconnecting fungi. In one study, some plants were deliberately infected with a fungal disease (not one that creates mycorrhizae). Researchers found that if a neighboring uninfected plant was connected via mycelium to the infected plant, it was dramatically less likely to catch the disease, than if the uninfected plant was NOT connected to an infected plant. It appeared that the mycelium was passing along a message that said, “Hey this disease is coming around, better get ready to resist!”

In a second study, the same basic effect was found when one plant was infected with aphids. The uninfected plants appear to get some signal through the mycelium from the infected plants, and its anti-aphid defenses kicked into gear before they were actually attacked by the aphids.

 

Fascinating Fungi

As you can see, the fungi of TCSNA are themselves complex and terrifically creative organisms. They play many important roles in our forest, by decomposing organic matter, acting as diseases, and forming mutually beneficial relationships with other organisms. They are the hidden partners in making our park a great place to enjoy nature.

Slime Molds: The Weirdos of the Forest

By Bruce Rottink, Volunteer Nature Guide & Retired Research Forester

 

Some strange things live in the forest at Tryon Creek State Natural Area (TCSNA) but for my money, none is stranger than the organisms known as slime molds. Taxonomists, folks who specialize in classifying organisms, haven’t all agreed on how to classify slime molds. They do, however, all agree that slime molds are clearly neither plants, animals, fungi nor bacteria. Slime molds are fascinating creatures because they have a very strange life cycle, and a highly unusual “body”. This note focuses only on the plasmodial slime molds, which are the type you will probably see at TCSNA. [Important: The slime mold names used in this note represent my best efforts at identifying these creatures, based on their strong similarity to photos on the internet.]

 

Where do slime molds grow?

The best place to find slime molds at TCSNA is on rotting wood. Old logs, tree stumps, or dead standing trees are prime candidates. This is because the primary foods for slime molds are bacteria and fungi. These are abundant in dead wood. Experts say the best times to find these slime molds is either spring or fall, when the forest is fairly damp. The slime molds pictured in this note were found at TCSNA in April, July, September and November.

 

What’s so weird about slime molds?

The weirdest thing about slime molds is their dramatic changes in shape over the course of their life cycle. Let’s start with the point in the life cycle which gives these organisms their name. The most active adult stage of the slime mold is when it looks like (surprise, surprise) slime! This nearly formless stage is called the plasmodial stage. At the risk of being indelicate, the adult slime mold in this stage looks like someone with serious nasal congestion blew their nose onto a log. This stage looks a little “blob-y” and has a distinct “wet” appearance. The plasmodium stage of life is the diploid stage where the slime mold has chromosomes from both parents, just like you. The example pictured below was on a decaying tree trunk that was lying on the ground near the West Horse Loop Trail.

 

Photo 1

Unknown species of slime mold in plasmodial stage on rotting log

 

These blobs of life are unusual in that they are giant cells with many thousands of nuclei in each cell. For most life forms, one nucleus per cell is the rule. Also, at this stage, there is a thin cell membrane, but no rigid cell wall. The big advantage to having giant wall free cells is that these plasmodia can move by streaming the cell contents (cytoplasm) from one end of the plasmodium to the other end. The plasmodium will move in the direction that the streaming cytoplasm is heading. Laboratory studies have observed slime molds moving at approximately 1 inch per day towards concentrations of food.

When food starts to become scarce, the slime mold moves into the next stage of life. This stage is called a sporangium. The sporangium, as you might guess, is the stage that produces the spores. The forms of the sporangium differ greatly, depending on the species of slime mold.

 

How does the sporangium develop?

There are many different sizes, shapes and colors of sporangia, depending on the species of slime mold. Examples I’ve found at TCSNA are included below.

The series of photos below shows the development of a single sporangium found on a standing dead tree along the Trillium Trail is shown. Unfortunately, I found the sporangium when it was completely developed. This was formed by a plasmodial mass similar to the one pictured above. A tough shell develops to protect the developing spores on the inside. This sporangium is the species of slime mold called “false puffball”. Its scientific name is Enteridium lycoperdon. The most striking thing about this sporangium is that in my entire life I have never seen a natural object that has looked so much like plastic. Measured vertically along the trunk of the tree, it is about 3 inches long.

 

Photo 2

Slime mold near Trillium Trail– April 02, 2016

 

Just one day later, the surface of the sporangium has started to crack apart. The interior of the sporangium is filled with small brown spores. This particular sporangium was growing very close to the trail. I suspect the yellowish area which is oozing just a little yellow fluid is in fact a wound inflicted by a curious visitor to the park!

 

Photo 3

Trillium Trail slime mold– April 03, 2016– red arrows point to apparent wound

 

After three additional days, the surface of the sporangium is starting to seriously deteriorate, exposing even more brown spores.

 

Photo 4

Trillium Trail slime mold– April 06, 2016

 

In just an additional 3 days, the surface of the sporangium is almost completely gone, and many of the spores have been washed or blown away. Now the spores will germinate and produce     single celled amoeba-like cells that crawl around. These cells are the functional equivalent of human egg and sperm cells. These amoeba-like cells will find and fuse with a compatible amoeba-like cell. Then this fused cell will grow to become a new plasmodium, restarting the cycle.

 

Photo 5

Trillium Trail slime mold– April 09, 2016

 

The photo below gives you an idea of what the interior of this slime mold sporangia contains.

 

Photo 6

Brown powdery spots from inside the sporangium

 

While observing the above slime mold, I noticed some insects on its surface. As I approached quite close to take photos, the insects boldly maintained their positions. I sent this picture to Josh Vlach, an entomologist with the Oregon Department of Agriculture. He indicated this insect “looks like a Mycetophilidae possibly a species of Mycetophila”. Mycetophilidae is a family of insects, while the Mycetophila is a genus within that family. The common name for this group of insects is “fungus gnats.” This type of insects oftentimes lay their eggs in either mushrooms or slime molds. The developing larvae eat the mushroom or slime mold. One of these insects appears in the picture below.

 

Photo 7

A fungus gnat investigating a slime mold sporangium

 

Are there other kinds of slime mold at TCSNA?

Yes, I’ve spotted several other kinds of slime molds at Tryon Creek. Below is an example of a slime mold in an advanced stage of spore production. It was on the side of a downed log just off the Old Main Trail. The cluster of spore producing bodies seem to be resting on a thin sheet of shiny material that looks like dried slug slime. The entire cluster is 9 inches horizontally, and 6-1/2 inches vertically. The thickness of these spore clusters is less than 1 inch. When touched, they easily broke into a dark brown powder. These appear to be the species Tubifera ferruginosa, the red raspberry slime mold. In a younger stage, which I clearly missed, they are bright red.

 

Photo 8

Mature patch of ‘red raspberry’ slime mold– July 06, 2015

 

In the close-up below, you can see more detail of the structure of this slime mold.

 

Photo 9

Close-up of mature red raspberry slime mold reproductive structures

 

Next is the dog vomit slime mold. (I don’t name ‘em, I just report ‘em!) For once, you might like the Latin name better – Fuligo septica. Below is the sporangium of this colorful slime mold, which I found on a fallen log next to the Middle Creek Trail. The outer covering of the sporangium is just starting to break apart, revealing the brown spore bearing parts of the slime mold. On the moss just below the sporangium, you can see a few remnants of plasmodial strands that didn’t quite make it into the sporangium.

 

Photo 10

“Dog vomit” slime mold on fallen log on the side of Middle Creek Trail– September 13, 2014

 

Below is a close-up of the surface of the dog vomit slime mold. It is substantially different in both color and texture from the first slime mold pictured in this note.

 

Photo 11

Close-up of surface of dog vomit slime mold

 

Slime molds are an amazingly diverse group of organisms, and the next species testifies to that. The photo below appears to be a slime mold in the genus Trichia. The plasmodium, the white slimy part, and the sporangia, the orange balls on a stalk, coexist. The orange blobs bear the spores for this slime mold.

 

Photo 12

Slime mold found on an old stump on Middle Creek Trail– November 20, 2014

 

Not only are the sporangia of this species dramatically different in appearance, they also differ in size. The next photo compares the sporangia to my thumbnail.

 

Photo 13

My thumbnail provides size perspective

 

So what’s the lesson here?

The slime molds really are the weirdos of the forest, and trust me, this note only scratches the surface of that weirdness. They remind us that there are many ways to be successful. The slime molds eat the bacteria, and the larvae of the gnat fly eat the slime molds, and many things eat the gnat files. Every creature in creation is linked together, and we would be wise to remember that.

 

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